Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810803.1_cds_XP_016496368.1_10597
CDS Infomation

[gene=LOC107815323] [db_xref=GeneID:107815323] [protein=putative F-box/FBD/LRR-repeat protein At4g03220] [protein_id=XP_016496368.1] [location=complement(join(14960..15262,16216..16401,17060..18130))] [gbkey=CDS]
Sequence

ATGGAAACAAGATCTTCTAAGAAAATAAGGCTTATCAATGAAATCTACGAAAGCTTTTCA
TCATGTGGTGAAGATAGGATTAGTGATCTCCCAGATGCAGTTCTTCATCATATTCTGTTT
TCTCTTCCAATTAAATCCATTGCTAAAACTAGTGTCCTTTCTAAACGCTGGAGACATATA
TGGTACACATTCCCAGATCTTGATTTCACCACTATCAACGTCCCATCATGTATTAACTCA
ACTCCAAAAGTCAGCCCAAATAGTCGTAAAAAATTACACACTACTTGGAGTAATATCTCA
GGAGGAGCTGATTTCATTGATCAAGTGTTGTCCCTTCGCGAAAAAAATTCAGGGATTAGA
TTTCTCCGTTTTCGTGCAAATTTGAGTTTCTCTCGATTGAATAGCCTGATTCGTGGCGCT
GTTAAACACAATGTTCAAGAACTAGATGTTGAGGTTGCAACCAATGATTATTTTAATTTC
CCTCGAAGTGCAATTAGTAGTAATTCTTTAAGGGTTTTTAAATTAAAGTCTAAGTATCCA
GGGTTCAGGTTACCTCCTTCTTCAATTATGAAGAATGGTTTCAGAAATTTGTTCTCACTT
TCACTTTCGTGCATTATTATGTACGAGCAACCTTCACTTCATGATTTGTTTACAGATTCA
TCTTTTCCATTGCTAAAAAAGTTAAATCTTGAAAATTGTAGTGGACTAATATATCTACAT
GTAAGTTGTCGTGTACTTGAAGAATTAACCCTAGAGAGTTGCTATCAATTGGAGAATTTG
GACATTACGGGTCCAAAGTTGGAGAGTTTGAATGTCAAGAGTTGTTTTGATTCGTACAGT
AGTGATACTGAGGTCAAGATTAATGGTCCGAGACTTAAAAGGATAATATGGTCGAGTAAT
ACTATTACGGACCAAAGTTGTTTGGAGAATTTGAGTTCTTTGATTGAGGCATTGGTTGGT
TTTTTTGTTCTTCTTGAGGACCTTAGTGAAATGAAGCTTCGGAGTGTGAATGATTTCTTG
TCGGGGCTCTCTCATTCCCATTCTTTAGTTCTTGAAAACCAAAGCGTTGAGATTCTGTCG
AAAAATAATCACTTGGCAGGAATTTCACTGCGTCCTTTTACAAAACTGAGATGCTTAGAG
TTGCACACAGGATTCCGCAAACATAACATTCCAGGATTAGCAAATCTATTTAGGAGTTCT
CCAGCTACTAACACACTCATTCTCAACATTACCAATGACCACAACATCGAAAGAAGGAAA
TGGAACAGGGACCTATGGCAATTGTCCAACTCTGGTGAAGAAAGATTTTGGGAGTCACAA
AGCCATGCCATAAATTCCTTCCTTCAACATCTTAAAGTAGTAAAGATTTATGGATTCTCA
GAGTGTGAAAGTGATGTTAGTTTAGTCAAGTTTTTGCTGAAGCATGGCAAAGTGTTGCAA
GAAATGTTCTTGGGTGCCGAGCTTTCCAAATCAAGAGACTCTCTACATAGAGAAAAAATC
AAGTCACAAATAATGGGGTTTTCCAAGGCATCTTGTAACGCTAAGATTGTTTTCAAGTGA

Peptide Sequence

PEP ID

XP_016496368.1
PEP Infomation

PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220 [Nicotiana tabacum]
Sequence

METRSSKKIRLINEIYESFSSCGEDRISDLPDAVLHHILFSLPIKSIAKTSVLSKRWRHI
WYTFPDLDFTTINVPSCINSTPKVSPNSRKKLHTTWSNISGGADFIDQVLSLREKNSGIR
FLRFRANLSFSRLNSLIRGAVKHNVQELDVEVATNDYFNFPRSAISSNSLRVFKLKSKYP
GFRLPPSSIMKNGFRNLFSLSLSCIIMYEQPSLHDLFTDSSFPLLKKLNLENCSGLIYLH
VSCRVLEELTLESCYQLENLDITGPKLESLNVKSCFDSYSSDTEVKINGPRLKRIIWSSN
TITDQSCLENLSSLIEALVGFFVLLEDLSEMKLRSVNDFLSGLSHSHSLVLENQSVEILS
KNNHLAGISLRPFTKLRCLELHTGFRKHNIPGLANLFRSSPATNTLILNITNDHNIERRK
WNRDLWQLSNSGEERFWESQSHAINSFLQHLKVVKIYGFSECESDVSLVKFLLKHGKVLQ
EMFLGAELSKSRDSLHREKIKSQIMGFSKASCNAKIVFK

Transcript Sequence

Gene sequence data has not been registered.